National Cancer Institute - Cancer.gov

Franciso Pereira Lobo, Ph.D.

Francisco Pereira Lobo, Ph.D.

  • Center for Cancer Research
  • National Cancer Institute
Bioinformatics Staff Scientist
Cancer and Developmental Biology Laboratory

RESEARCH SUMMARY

Dr. Francisco Pereira Lobo develops and uses bioinformatics tools to integrate omics data aiming at generating statistically sound and biologically meaningful knowledge. Currently, he is providing bioinformatics support for various research projects at CDBL, ranging from the description of single-cell atlas of non-model metazoan species to the study of organ development in vertebrates.

Areas of Expertise

Bioinformatics
Computational Biology
Genomics

Publications

Selected Publications

The rise of taxon-specific epitope predictors

Felipe Campelo, Francisco Pereira Lobo
Briefings in Bioinformatics. 25: 2024.
Full-Text Article
[ Journal Article ]

Mpox vaccine and infection-driven human immune signatures: an immunological analysis of an observational study

Hallie Cohn, Nathaniel Bloom, Gianna Y Cai, Jordan J Clark, Alison Tarke, Maria C Bermúdez-González, Deena R Altman, Luz Amarilis Lugo, Francisco Pereira Lobo, Susanna Marquez, Angela Amoako, Dalles Andre, Harm van Bakel, Christian C Cognini, Charles Gleason, Ana Gonzales-Reiche, Morgan van Kesteren, Giulio Kleiner, Neko Lyttle, Jacob D Mauldin, Brian C Monahan, Jessica R Nardulli, Annika Oostenink, Alberto Paniz-Mondolfi, Jose Polanco, Juan David Ramírez, Aria Rooker, Emilia Mia Sordillo, Komal Srivastava, Jin-Qiu Chen, Wenlin Ren, Lili Qin, Jennifer L Yates, Danielle T Hunt, William T Lee, Shane Crotty, Florian Krammer, Alba Grifoni, Alessandro Sette, Viviana Simon, Camila H Coelho
The Lancet Infectious Diseases. 23/11: 1302-1312, 2023.
Full-Text Article

CALANGO: A phylogeny-aware comparative genomics tool for discovering quantitative genotype-phenotype associations across species

Jorge Augusto Hongo, Giovanni Marques de Castro, Alison Pelri Albuquerque Menezes, Agnello César Rios Picorelli, Thieres Tayroni Martins da Silva, Eddie Luidy Imada, Luigi Marchionni, Luiz-Eduardo Del-Bem, Anderson Vieira Chaves, Gabriel Magno de Freitas Almeida, Felipe Campelo, Francisco Pereira Lobo
Patterns. 4/6: 2023.
Full-Text Article
[ Journal Article ]

Donor-derived acute myeloid leukemia in solid organ transplantation

Luigi Marchionni, Francisco Pereira Lobo, Rumen Kostadinov, Anna Serra, Federico Genzano Besso, Silvia Deaglio, Piero Stratta, Monica Berrino, Claudio Zanettini, Eddie Luidy Imada, Mohamed N Omar, Gianluca Gaidano, Benedetto Bruno, Giuseppe Saglio, Antonio Amoroso
American Journal of Transplantation. 22/12: 3111-3119, 2022.
Full-Text Article

Virus-host coevolution: common patterns of nucleotide motif usage in Flaviviridae and their hosts

Francisco P Lobo, Bruno EF Mota, Sérgio DJ Pena, Vasco Azevedo, Andréa M Macedo, Andreas Tauch, Carlos R Machado, Glória R Franco
PloS one. 4/7: e6282, 2009.
Full-Text Article
[ Journal Article ]