Frederic G. Barr, M.D., Ph.D.
Frederic G. Barr, M.D., Ph.D.
Deputy Chief
Head, Cancer Molecular Pathology Section
Senior Investigator

Center for Cancer Research
National Cancer Institute

Building 10 - Magnuson CC, Room 3B55
Bethesda, MD 20892-1500
301-594-3780

Dr. Barr’s research laboratory uses a multidisciplinary approach involving genomics and bioinformatics along with cell culture and animal models to study recurrent chromosomal alterations, such as translocations and amplification, in cancer. His laboratory focuses on rhabdomyosarcoma, a family of myogenic soft tissue cancers usually occurring in children, to investigate the genetic basis, biological consequences, and therapeutic implications of chromosomal alterations in these cancers. In addition, Dr. Barr works closely with clinicians at the National Cancer Institute and in the Children's Oncology Group (the nationwide multi-institutional group conducting treatment trials for pediatric cancer) to investigate the utility of these recurrent chromosomal alterations as biomarkers for diagnosis and management.

Areas of Expertise
1) pediatric cancer, 2) sarcoma, 3) chromosome translocation, 4) gene fusion, 5) amplification, 6) molecular diagnostics

Dr. Barr's research interest is molecular genetics of cancer with a focus on recurrent chromosomal alterations in sarcomas. His research team has most recently been conducting a multidisciplinary approach to understand the biological consequences of these genetic events in rhabdomyosarcoma, a family of pediatric soft tissue cancers. Major focal points of this research program are fusions of the PAX3 or PAX7 gene with the FOXO1 (FKHR) gene to generate fusion oncoproteins, the amplification of several oncogenic loci, and genome-wide changes in DNA methylation. These studies revealed that the gene fusions result in an aberrant gene expression program that contributes to tumorigenesis. Amplification events involving known and new candidate oncogenes occur in specific gene fusion subsets and are associated with distinct clinical outcomes. Distinct DNA methylation patterns are associated with the fusion-positive and fusion-negative subtypes of rhabdomyosarcoma. Current studies are examining tumorigenic effects, functional domains, downstream targets, regulation of gene expression, and clinical applications.

Scientific Focus Areas:
Cancer Biology, Chromosome Biology, Genetics and Genomics, Molecular Biology and Biochemistry

View Dr. Barr's PubMed Summary.

Selected Key Publications
  1. Galili N, Davis RJ, Fredericks WJ, Mukhopadhyay S, Rauscher FJ III, Emanuel BS, Rovera G, Barr FG.
    Nat Genet. 5 : 230-5, 1993. [ Journal Article ]
  2. Davis RJ, Barr FG.
    Proc Natl Acad Sci U S A. 94: 8047-51, 1997. [ Journal Article ]
  3. Xia SJ, Holder DD, Pawel BR, Zhang C, Barr FG.
    Am J Pathol. 175: 2600-8, 2009. [ Journal Article ]
  4. Duan F, Smith LM, Gustafson DM, Zhang C, Dunlevy MJ, Gastier-Foster JM, Barr FG
    Genes Chromosomes Cancer. 51: 662-74, 2012. [ Journal Article ]
  5. Shern JF, Chen L, Chmielecki J, Wei JS, Patidar R, Rosenberg M, Ambrogio L, Auclair D, Wang J, Song YK, Tolman C, Hurd L, Liao H, Zhang S, Bogen D, Brohl A, Sindiri S, Catchpoole D, Badgett T, Getz G, Mora J, Anderson J, Skapek SX, Barr FG, Meyerson M, Hawkins DS, Khan J
    Cancer Discovery. 4: 216-231, 2014. [ Journal Article ]

Dr. Barr received his undergraduate education at Williams College, and then attended Washington University School of Medicine, where he obtained his M.D. and Ph.D. degrees. Subsequently, he received residency training in anatomic pathology at the Hospital of the University of Pennsylvania and performed postdoctoral research in the Division of Human Genetics and Molecular Biology at the Children's Hospital of Philadelphia. Before coming to the NIH, Dr. Barr was a faculty member in the Department of Pathology and Laboratory Medicine at the University of Pennsylvania School of Medicine. In addition to his research activities, Dr. Barr serves on the Steering Committee of the Soft Tissue Sarcoma Committee of the Children's Oncology Group, and is the Senior Associate Editor for the Journal of Molecular DIagnostics.

Name Position
Bishwanath Chatterjee Ph.D. Research Geneticist
Julia Hisey Postbaccalaureate Fellow
Mary Olanich Ph.D. Postdoctoral Fellow (CRTA)
Puspa Pandey Ph.D. Postdoctoral Fellow (CRTA)
Wenyue Sun, Ph.D. Staff Scientist

Summary

Dr. Barr’s research laboratory uses a multidisciplinary approach involving genomics and bioinformatics along with cell culture and animal models to study recurrent chromosomal alterations, such as translocations and amplification, in cancer. His laboratory focuses on rhabdomyosarcoma, a family of myogenic soft tissue cancers usually occurring in children, to investigate the genetic basis, biological consequences, and therapeutic implications of chromosomal alterations in these cancers. In addition, Dr. Barr works closely with clinicians at the National Cancer Institute and in the Children's Oncology Group (the nationwide multi-institutional group conducting treatment trials for pediatric cancer) to investigate the utility of these recurrent chromosomal alterations as biomarkers for diagnosis and management.

Areas of Expertise
1) pediatric cancer, 2) sarcoma, 3) chromosome translocation, 4) gene fusion, 5) amplification, 6) molecular diagnostics

Research

Dr. Barr's research interest is molecular genetics of cancer with a focus on recurrent chromosomal alterations in sarcomas. His research team has most recently been conducting a multidisciplinary approach to understand the biological consequences of these genetic events in rhabdomyosarcoma, a family of pediatric soft tissue cancers. Major focal points of this research program are fusions of the PAX3 or PAX7 gene with the FOXO1 (FKHR) gene to generate fusion oncoproteins, the amplification of several oncogenic loci, and genome-wide changes in DNA methylation. These studies revealed that the gene fusions result in an aberrant gene expression program that contributes to tumorigenesis. Amplification events involving known and new candidate oncogenes occur in specific gene fusion subsets and are associated with distinct clinical outcomes. Distinct DNA methylation patterns are associated with the fusion-positive and fusion-negative subtypes of rhabdomyosarcoma. Current studies are examining tumorigenic effects, functional domains, downstream targets, regulation of gene expression, and clinical applications.

Scientific Focus Areas:
Cancer Biology, Chromosome Biology, Genetics and Genomics, Molecular Biology and Biochemistry

Publications

View Dr. Barr's PubMed Summary.

Selected Key Publications
  1. Galili N, Davis RJ, Fredericks WJ, Mukhopadhyay S, Rauscher FJ III, Emanuel BS, Rovera G, Barr FG.
    Nat Genet. 5 : 230-5, 1993. [ Journal Article ]
  2. Davis RJ, Barr FG.
    Proc Natl Acad Sci U S A. 94: 8047-51, 1997. [ Journal Article ]
  3. Xia SJ, Holder DD, Pawel BR, Zhang C, Barr FG.
    Am J Pathol. 175: 2600-8, 2009. [ Journal Article ]
  4. Duan F, Smith LM, Gustafson DM, Zhang C, Dunlevy MJ, Gastier-Foster JM, Barr FG
    Genes Chromosomes Cancer. 51: 662-74, 2012. [ Journal Article ]
  5. Shern JF, Chen L, Chmielecki J, Wei JS, Patidar R, Rosenberg M, Ambrogio L, Auclair D, Wang J, Song YK, Tolman C, Hurd L, Liao H, Zhang S, Bogen D, Brohl A, Sindiri S, Catchpoole D, Badgett T, Getz G, Mora J, Anderson J, Skapek SX, Barr FG, Meyerson M, Hawkins DS, Khan J
    Cancer Discovery. 4: 216-231, 2014. [ Journal Article ]

Biography

Dr. Barr received his undergraduate education at Williams College, and then attended Washington University School of Medicine, where he obtained his M.D. and Ph.D. degrees. Subsequently, he received residency training in anatomic pathology at the Hospital of the University of Pennsylvania and performed postdoctoral research in the Division of Human Genetics and Molecular Biology at the Children's Hospital of Philadelphia. Before coming to the NIH, Dr. Barr was a faculty member in the Department of Pathology and Laboratory Medicine at the University of Pennsylvania School of Medicine. In addition to his research activities, Dr. Barr serves on the Steering Committee of the Soft Tissue Sarcoma Committee of the Children's Oncology Group, and is the Senior Associate Editor for the Journal of Molecular DIagnostics.

Team

Name Position
Bishwanath Chatterjee Ph.D. Research Geneticist
Julia Hisey Postbaccalaureate Fellow
Mary Olanich Ph.D. Postdoctoral Fellow (CRTA)
Puspa Pandey Ph.D. Postdoctoral Fellow (CRTA)
Wenyue Sun, Ph.D. Staff Scientist