David M. Sturgill, Ph.D.
David M. Sturgill, Ph.D.
Staff Scientist

Comparative genomics, transcriptomics, and epigenomics. Applications of high-throughput sequencing. Tool development for RNA-SEQ. Software Analysis of splicing from RNA-Seq data:

Areas of Expertise
Splicing Analysis Kit (Spanki)

Contact Info

David M. Sturgill, Ph.D.
Center for Cancer Research
National Cancer Institute
Building 41, Room B622
Bethesda, MD 20892
301-827-4040
davidsturgill@mail.nih.gov

Comparative genomics, transcriptomics, and epigenomics. Applications of high-throughput sequencing. Tool development for RNA-SEQ.

Software

Analysis of splicing from RNA-Seq data:

Selected Publications
  1. Weber BN, Chi AW, Chavez A, Yashiro-Ohtani Y, Yang Q, Shestova O, Bhandoola A.
    Nature. 476: 63-8, 2011. [ Journal Article ]
  2. Bell JJ, Bhandoola A.
    Nature. 452: 764-7, 2008. [ Journal Article ]
  3. Sturgill D, Malone JH, Sun X, Smith HE, Rabinow L, Samson ML, Oliver B.
    BMC Bioinformatics. 14: 320, 2013. [ Journal Article ]
  4. Deng X, Hiatt JB, Nguyen DK, Ercan S, Sturgill D, Hillier LW, Schlesinger F, Davis CA, Reinke VJ, Gingeras TR, Shendure J, Waterston RH, Oliver B, Lieb JD, Disteche CM.
    Nat. Genet.. 43: 1179-85, 2011. [ Journal Article ]
  5. Graveley BR, Brooks AN, Carlson JW, Duff MO, Landolin JM, Yang L, Artieri CG, van Baren MJ, Boley N, Booth BW, Brown JB, Cherbas L, Davis CA, Dobin A, Li R, Lin W, Malone JH, Mattiuzzo NR, Miller D, Sturgill D, Tuch BB, Zaleski C, Zhang D, Blanchette M, Dudoit S, Eads B, Green RE, Hammonds A, Jiang L, Kapranov P, Langton L, Perrimon N, Sandler JE, Wan KH, Willingham A, Zhang Y, Zou Y, Andrews J, Bickel PJ, Brenner SE, Brent MR, Cherbas P, Gingeras TR, Hoskins RA, Kaufman TC, Oliver B, Celniker SE.
    Nature. 471: 473-9, 2011. [ Journal Article ]

Research

Comparative genomics, transcriptomics, and epigenomics. Applications of high-throughput sequencing. Tool development for RNA-SEQ.

Software

Analysis of splicing from RNA-Seq data:

Publications

Selected Publications
  1. Weber BN, Chi AW, Chavez A, Yashiro-Ohtani Y, Yang Q, Shestova O, Bhandoola A.
    Nature. 476: 63-8, 2011. [ Journal Article ]
  2. Bell JJ, Bhandoola A.
    Nature. 452: 764-7, 2008. [ Journal Article ]
  3. Sturgill D, Malone JH, Sun X, Smith HE, Rabinow L, Samson ML, Oliver B.
    BMC Bioinformatics. 14: 320, 2013. [ Journal Article ]
  4. Deng X, Hiatt JB, Nguyen DK, Ercan S, Sturgill D, Hillier LW, Schlesinger F, Davis CA, Reinke VJ, Gingeras TR, Shendure J, Waterston RH, Oliver B, Lieb JD, Disteche CM.
    Nat. Genet.. 43: 1179-85, 2011. [ Journal Article ]
  5. Graveley BR, Brooks AN, Carlson JW, Duff MO, Landolin JM, Yang L, Artieri CG, van Baren MJ, Boley N, Booth BW, Brown JB, Cherbas L, Davis CA, Dobin A, Li R, Lin W, Malone JH, Mattiuzzo NR, Miller D, Sturgill D, Tuch BB, Zaleski C, Zhang D, Blanchette M, Dudoit S, Eads B, Green RE, Hammonds A, Jiang L, Kapranov P, Langton L, Perrimon N, Sandler JE, Wan KH, Willingham A, Zhang Y, Zou Y, Andrews J, Bickel PJ, Brenner SE, Brent MR, Cherbas P, Gingeras TR, Hoskins RA, Kaufman TC, Oliver B, Celniker SE.
    Nature. 471: 473-9, 2011. [ Journal Article ]