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Our Science – Zhurkin Website

Victor B. Zhurkin, Ph.D.

Selected Publications

1)  Zhurkin VB, Olson WK.
Can nucleosomal DNA be described by an elastic model?: Comment on "Sequence-dependent collective properties of DNAs and their role in biological systems" by Pasquale De Santis and Anita Scipioni.
Phys Life Rev. 10: 70-2, 2013.
2)  Nikitina T, Wang D, Gomberg M, Grigoryev SA, Zhurkin VB.
Combined Micrococcal Nuclease and Exonuclease III Digestion Reveals Precise Positions of the Nucleosome Core/Linker Junctions: Implications for High-Resolution Nucleosome Mapping.
J. Mol. Biol. [Epub ahead of print], 2013.
3)  Karamychev VN, Wang D, Mazur SJ, Appella E, Neumann RD, Zhurkin VB, Panyutin IG.
Radioprobing the conformation of DNA in a p53-DNA complex.
Int. J. Radiat. Biol. 88: 1039-45, 2012.
4)  Cui F, Cole HA, Clark DJ, Zhurkin VB.
Transcriptional activation of yeast genes disrupts intragenic nucleosome phasing.
Nucleic Acids Res. 40: 10753-64, 2012.
5)  Cui F, Sirotin MV, Zhurkin VB.
Impact of Alu repeats on the evolution of human p53 binding sites.
Biol. Direct. 6: 2, 2011.
6)  Zhurkin VB.
The first thirty years of nucleosome positioning: comment on.
Phys Life Rev. 8: 64-6; discussion 69-72, 2011.
7)  Olson WK, Zhurkin VB.
Working the kinks out of nucleosomal DNA.
Curr. Opin. Struct. Biol. 21: 348-57, 2011.
8)  Sahu G, Wang D, Chen CB, Zhurkin VB, Harrington RE, Appella E, Hager GL, Nagaich AK.
p53 binding to nucleosomal DNA depends on the rotational positioning of DNA response element.
J. Biol. Chem. 285: 1321-32, 2010.
9)  Wang D, Ulyanov NB, Zhurkin VB.
Sequence-dependent Kink-and-Slide deformations of nucleosomal DNA facilitated by histone arginines bound in the minor groove.
J. Biomol. Struct. Dyn. 27: 843-59, 2010.
10)  Cui F, Zhurkin VB.
Structure-based analysis of DNA sequence patterns guiding nucleosome positioning in vitro.
J. Biomol. Struct. Dyn. 27: 821-41, 2010.
Click Here to View Expanded Bibliography.

This page was last updated on 5/3/2013.