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Our Science – Dauter Website

Zbigniew Dauter, Ph.D.

Selected Publications

1)  Brzozowski AM, Pike AC, Dauter Z, Hubbard RE, Bonn T, Engström O, Ohman L, Greene GL, Gustafsson JA, Carlquist M.
Molecular basis of agonism and antagonism in the oestrogen receptor.
Nature. 389: 753-8, 1997.
[Journal]
2)  Wang J, Dauter M, Alkire R, Joachimiak A, Dauter Z.
Triclinic lysozyme at 0.65 A resolution.
Acta Crystallogr. D Biol. Crystallogr. 63: 1254-68, 2007.
[Journal]
3)  Jedrzejczak R, Wang J, Dauter M, Szczesny RJ, Stepien PP, Dauter Z.
Human Suv3 protein reveals unique features among SF2 helicases.
Acta Crystallogr. D Biol. Crystallogr. 67: 988-96, 2011.
[Journal]
4)  Brzezinski K, Brzuszkiewicz A, Dauter M, Kubicki M, Jaskolski M, Dauter Z.
High regularity of Z-DNA revealed by ultra high-resolution crystal structure at 0.55 A.
Nucleic Acids Res. 39: 6238-48, 2011.
[Journal]
5)  Rajashankar K, Dauter Z.
Data collection for crystallographic structure determination.
Methods Mol. Biol. 1140: 211-37, 2014.
[Journal]
6)  Jaskolski M, Dauter Z, Wlodawer A.
A brief history of macromolecular crystallography, illustrated by a family tree and its Nobel fruits.
FEBS J. [Epub ahead of print], 2014.
[Journal]
7)  Sliwiak J, Jaskolski M, Dauter Z, McCoy AJ, Read RJ.
Likelihood-based molecular-replacement solution for a highly pathological crystal with tetartohedral twinning and sevenfold translational noncrystallographic symmetry.
Acta Crystallogr. D Biol. Crystallogr. 70: 471-80, 2014.
[Journal]
8)  Dauter Z, Jaskolski M.
Missed opportunities in crystallography.
FEBS J. [Epub ahead of print], 2014.
[Journal]
9)  Domagalski MJ, Zheng H, Zimmerman MD, Dauter Z, Wlodawer A, Minor W.
The quality and validation of structures from structural genomics.
Methods Mol. Biol. 1091: 297-314, 2014.
[Journal]
10)  Pletnev S, Subach FV, Verkhusha VV, Dauter Z.
The rotational order-disorder structure of the reversibly photoswitchable red fluorescent protein rsTagRFP.
Acta Crystallogr. D Biol. Crystallogr. 70: 31-9, 2014.
[Journal]
11)  Luo Z, Rajashankar K, Dauter Z.
Weak data do not make a free lunch, only a cheap meal.
Acta Crystallogr. D Biol. Crystallogr. 70: 253-60, 2014.
[Journal]
12)  Dauter Z, Weiss MS, Einspahr H, Baker EN.
Expectation bias and information content.
Acta Crystallogr. Sect. F Struct. Biol. Cryst. Commun. 69: 83, 2013.
[Journal]
13)  Dauter Z, Weiss MS, Einspahr H, Baker EN.
Expectation bias and information content.
Acta Crystallogr. D Biol. Crystallogr. 69: 141, 2013.
[Journal]
14)  Borek D, Dauter Z, Otwinowski Z.
Identification of patterns in diffraction intensities affected by radiation exposure.
J Synchrotron Radiat. 20: 37-48, 2013.
[Journal]
15)  Ruszkowski M, Brzezinski K, Jedrzejczak R, Dauter M, Dauter Z, Sikorski M, Jaskolski M.
Medicago truncatula histidine-containing phosphotransfer protein: Structural and biochemical insights into the cytokinin transduction pathway in plants.
FEBS J. 280: 3709-20, 2013.
[Journal]
16)  Dauter Z.
On optimal placement of molecules in the unit cell.
Acta Crystallogr. D Biol. Crystallogr. 69: 872-8, 2013.
[Journal]
17)  Liebschner D, Dauter M, Brzuszkiewicz A, Dauter Z.
On the reproducibility of protein crystal structures: five atomic resolution structures of trypsin.
Acta Crystallogr. D Biol. Crystallogr. 69: 1447-62, 2013.
[Journal]
18)  Dauter Z.
Placement of molecules in (not out of) the cell.
Acta Crystallogr. D Biol. Crystallogr. 69: 2-4, 2013.
[Journal]
19)  Wlodawer A, Minor W, Dauter Z, Jaskolski M.
Protein crystallography for aspiring crystallographers or how to avoid pitfalls and traps in macromolecular structure determination.
FEBS J. 280: 5705-36, 2013.
[Journal]
20)  Pletnev VZ, Pletneva NV, Lukyanov KA, Souslova EA, Fradkov AF, Chudakov DM, Chepurnykh T, Yampolsky IV, Wlodawer A, Dauter Z, Pletnev S.
Structure of the red fluorescent protein from a lancelet (Branchiostoma lanceolatum): a novel GYG chromophore covalently bound to a nearby tyrosine.
Acta Crystallogr. D Biol. Crystallogr. 69: 1850-60, 2013.
[Journal]
21)  Pletneva NV, Pletnev VZ, Souslova E, Chudakov DM, Lukyanov S, Martynov VI, Arhipova S, Artemyev I, Wlodawer A, Dauter Z, Pletnev S.
Yellow fluorescent protein phiYFPv (Phialidium): structure and structure-based mutagenesis.
Acta Crystallogr. D Biol. Crystallogr. 69: 1005-12, 2013.
[Journal]
22)  Lazny R, Wolosewicz K, Dauter Z, Brzezinski K.
(1RS,2SR,5SR)-9-Benzyl-2-[(1RS)-1-hy-droxy-benz-yl]-9-aza-bicyclo-[3.3.1]nonan-3-one from synchrotron data.
Acta Crystallogr Sect E Struct Rep Online. 68: o1367, 2012.
[Journal]
23)  Brzezinski K, Lazny R, Sienkiewicz M, Wojtulewski S, Dauter Z.
(2R)-8-Benzyl-2-[(S)-hy-droxy(phen-yl)meth-yl]-8-aza-bicyclo-[3.2.1]octan-3-one.
Acta Crystallogr Sect E Struct Rep Online. 68: o149-50, 2012.
[Journal]
24)  Pletnev S, Subach FV, Dauter Z, Wlodawer A, Verkhusha VV.
A structural basis for reversible photoswitching of absorbance spectra in red fluorescent protein rsTagRFP.
J. Mol. Biol. 417: 144-51, 2012.
[Journal]
25)  Weiss MS, Einspahr H, Baker T, Dauter Z.
Another case of fraud in structural biology.
Acta Crystallogr. Sect. F Struct. Biol. Cryst. Commun. 68: 365, 2012.
[Journal]
26)  Urusova DV, Isupov MN, Antonyuk S, Kachalova GS, Obmolova G, Vagin AA, Lebedev AA, Burenkov GP, Dauter Z, Bartunik HD, Lamzin VS, Melik-Adamyan WR, Mueller TD, Schnackerz KD.
Crystal structure of D-serine dehydratase from Escherichia coli.
Biochim. Biophys. Acta. 1824: 422-32, 2012.
[Journal]
27)  Liebschner D, Brzezinski K, Dauter M, Dauter Z, Nowak M, Kur J, Olszewski M.
Dimeric structure of the N-terminal domain of PriB protein from Thermoanaerobacter tengcongensis solved ab initio.
Acta Crystallogr. D Biol. Crystallogr. 68: 1680-9, 2012.
[Journal]
28)  Brzezinski K, Dauter Z, Jaskolski M.
High-resolution structures of complexes of plant S-adenosyl-L-homocysteine hydrolase (Lupinus luteus).
Acta Crystallogr. D Biol. Crystallogr. 68: 218-31, 2012.
[Journal]
29)  Liebschner D, Dauter M, Rosenbaum G, Dauter Z.
How good can our beamlines be?.
Acta Crystallogr. D Biol. Crystallogr. 68: 1430-6, 2012.
[Journal]
30)  Baker EN, Dauter Z.
Nobel Prize for Chemistry 2012: GPCRs seen through a crystal ball.
Acta Crystallogr. D Biol. Crystallogr. 68: 1439-40, 2012.
[Journal]
31)  Baker EN, Dauter Z.
Small angle scattering - moving forward.
Acta Crystallogr. D Biol. Crystallogr. 68: 619, 2012.
[Journal]
32)  Pletnev S, Pletneva NV, Souslova EA, Chudakov DM, Lukyanov S, Wlodawer A, Dauter Z, Pletnev V.
Structural basis for bathochromic shift of fluorescence in far-red fluorescent proteins eqFP650 and eqFP670.
Acta Crystallogr. D Biol. Crystallogr. 68: 1088-97, 2012.
[Journal]
33)  Brzezinski K, Dauter Z, Jaskolski M.
Structures of NodZ α1,6-fucosyltransferase in complex with GDP and GDP-fucose.
Acta Crystallogr. D Biol. Crystallogr. 68: 160-8, 2012.
[Journal]
34)  Brzezinski K, Walejko P, Baj A, Witkowski S, Dauter Z.
2,2,5,7,8-Penta-methyl-chroman-6-yl 2,3,4,6-tetra-O-acetyl-alpha-d-glucopyran-oside from synchrotron data.
Acta Crystallogr Sect E Struct Rep Online. 67: o718, 2011.
[Journal]
35)  Brzezinski K, Baj A, Wałejko P, Witkowski S, Dauter Z.
6-Hy-droxy-2,5,7,8-tetra-methyl-3,4-dihydro-2H-1-benzopyran-2-carbonitrile, from synchrotron data.
Acta Crystallogr Sect E Struct Rep Online. 67: o1901, 2011.
[Journal]
36)  Li M, Dimaio F, Zhou D, Gustchina A, Lubkowski J, Dauter Z, Baker D, Wlodawer A.
Crystal structure of XMRV protease differs from the structures of other retropepsins.
Nat. Struct. Mol. Biol. 18: 227-9, 2011.
[Journal]
37)  Pletneva NV, Pletnev VZ, Shemiakina II, Chudakov DM, Artemyev I, Wlodawer A, Dauter Z, Pletnev S.
Crystallographic study of red fluorescent protein eqFP578 and its far-red variant Katushka reveals opposite pH-induced isomerization of chromophore.
Protein Sci. 20: 1265-74, 2011.
[Journal]
38)  Dauter M, Dauter Z.
Deprotonated imidodiphosphate in AMPPNP-containing protein structures.
Acta Crystallogr. D Biol. Crystallogr. 67: 1073-5, 2011.
[Journal]
39)  Brzezinski K, Dauter Z, Baj A, Walejko P, Witkowski S.
rac-6-Hy-droxy-2,5,7,8-tetra-methyl-chroman-2-carboxamide from synchrotron data.
Acta Crystallogr Sect E Struct Rep Online. 67: o503-4, 2011.
[Journal]
40)  Brzezinski K, Tomkiel AM, Lotowski Z, Morzycki J, Dauter Z.
Bis[3alpha,7alpha,12alpha-tris-(4-nitro-benzo-yloxy)-5beta-cholan-24-yl] disulfide-ethyl acetate-n-hexane (4/4/1).
Acta Crystallogr Sect E Struct Rep Online. 67: o74-5, 2010.
[Journal]
41)  Dauter Z, Baker EN.
Black sheep among the flock of protein structures.
Acta Crystallogr. D Biol. Crystallogr. 66: 1, 2010.
[Journal]
42)  Dauter Z.
Carrying out an optimal experiment.
Acta Crystallogr. D Biol. Crystallogr. 66: 389-92, 2010.
[Journal]
43)  Weiss MS, Einspahr H, Baker EN, Dauter Z, Kaysser-Pyzalla AR, Kostorz G, Larsen S.
Citations in supplementary material.
Acta Crystallogr. Sect. F Struct. Biol. Cryst. Commun. 66: 1550-1, 2010.
[Journal]
44)  Weiss MS, Einspahr H, Baker EN, Dauter Z, Kaysser-Pyzalla AR, Kostorz G, Larsen S.
Citations in supplementary material.
Acta Crystallogr. D Biol. Crystallogr. 66: 1269-70, 2010.
[Journal]
45)  Dauter Z, Jaskolski M, Wlodawer A.
Impact of synchrotron radiation on macromolecular crystallography: a personal view.
J Synchrotron Radiat. 17: 433-44, 2010.
[Journal]
46)  Baker EN, Dauter Z, Einspahr H, Weiss MS.
In defence of our science - validation now!.
Acta Crystallogr. Sect. F Struct. Biol. Cryst. Commun. 66: 112, 2010.
[Journal]
47)  Baker EN, Dauter Z, Einspahr H, Weiss MS.
In defence of our science--validation now!.
Acta Crystallogr. D Biol. Crystallogr. 66: 115, 2010.
[Journal]
48)  Moulaei T, Shenoy SR, Giomarelli B, Thomas C, McMahon JB, Dauter Z, O'Keefe BR, Wlodawer A.
Monomerization of viral entry inhibitor griffithsin elucidates the relationship between multivalent binding to carbohydrates and anti-HIV activity.
Structure. 18: 1104-15, 2010.
[Journal]
49)  Czerwinski A, Valenzuela F, Afonine P, Dauter M, Dauter Z.
N-{N-[2-(3,5-Difluorophenyl)acetyl]-(S)-alanyl}-(S)-phenylglycine tert-butyl ester (DAPT): an inhibitor of gamma-secretase, revealing fine electronic and hydrogen-bonding features.
Acta Crystallogr C. 66: o585-8, 2010.
[Journal]
50)  Pletneva NV, Pletnev VZ, Lukyanov KA, Gurskaya NG, Goryacheva EA, Martynov VI, Wlodawer A, Dauter Z, Pletnev S.
Structural evidence for a dehydrated intermediate in green fluorescent protein chromophore biosynthesis.
J. Biol. Chem. 285: 15978-84, 2010.
[Journal]
51)  Li M, Gustchina A, Rasulova FS, Melnikov EE, Maurizi MR, Rotanova TV, Dauter Z, Wlodawer A.
Structure of the N-terminal fragment of Escherichia coli Lon protease.
Acta Crystallogr. D Biol. Crystallogr. 66: 865-73, 2010.
[Journal]
52)  Pletnev S, Subach FV, Dauter Z, Wlodawer A, Verkhusha VV.
Understanding blue-to-red conversion in monomeric fluorescent timers and hydrolytic degradation of their chromophores.
J. Am. Chem. Soc. 132: 2243-53, 2010.
[Journal]
53)  Dauter Z, Wlodawer A.
Proteins do not have strong spines after all.
Structure. 17: 1278-9, 2009.
[Journal]
54)  Pletnev S, Morozova KS, Verkhusha VV, Dauter Z.
Rotational order-disorder structure of fluorescent protein FP480.
Acta Crystallogr. D Biol. Crystallogr. 65: 906-12, 2009.
[Journal]
55)  Pletnev S, Gurskaya NG, Pletneva NV, Lukyanov KA, Chudakov DM, Martynov VI, Popov VO, Kovalchuk MV, Wlodawer A, Dauter Z, Pletnev V.
Structural basis for phototoxicity of the genetically encoded photosensitizer KillerRed.
J. Biol. Chem. 284: 32028-39, 2009.
[Journal]
56)  Brzuszkiewicz A, Nowak E, Dauter Z, Dauter M, Cieslinski H, Dlugolecka A, Kur J.
Structure of EstA esterase from psychrotrophic Pseudoalteromonas sp. 643A covalently inhibited by monoethylphosphonate.
Acta Crystallogr. Sect. F Struct. Biol. Cryst. Commun. 65: 862-5, 2009.
[Journal]
57)  Miller M, Dauter Z, Cherry S, Tropea JE, Wlodawer A.
Structure of the Taz2 domain of p300: insights into ligand binding.
Acta Crystallogr. D Biol. Crystallogr. 65: 1301-8, 2009.
[Journal]
58)  Nowak E, Brzuszkiewicz A, Dauter M, Dauter Z, Rosenbaum G.
To scavenge or not to scavenge: that is the question.
Acta Crystallogr. D Biol. Crystallogr. 65: 1004-6, 2009.
[Journal]
59)  Pletnev S, Shcherbo D, Chudakov DM, Pletneva N, Merzlyak EM, Wlodawer A, Dauter Z, Pletnev V.
A crystallographic study of bright far-red fluorescent protein mKate reveals pH-induced cis-trans isomerization of the chromophore.
J. Biol. Chem. 283: 28980-7, 2008.
[Journal]
60)  Baker E, Dauter Z, Guss M, Einspahr H.
Deposition of diffraction images to be discussed at the Open Meeting of the Commission on Biological Macromolecules of the IUCr in Osaka.
Acta Crystallogr. Sect. F Struct. Biol. Cryst. Commun. 64: 231-2, 2008.
[Journal]
61)  Baker E, Dauter Z, Guss M, Einspahr H.
Deposition of diffraction images to be discussed at the Open Meeting of the Commission on Biological Macromolecules of the IUCr in Osaka.
Acta Crystallogr. D Biol. Crystallogr. 64: 337-8, 2008.
[Journal]
62)  Davis J, Wang J, Tropea JE, Zhang D, Dauter Z, Waugh DS, Wlodawer A.
Novel fold of VirA, a type III secretion system effector protein from Shigella flexneri.
Protein Sci. 17: 2167-73, 2008.
[Journal]
63)  Wlodawer A, Minor W, Dauter Z, Jaskolski M.
Protein crystallography for non-crystallographers, or how to get the best (but not more) from published macromolecular structures.
FEBS J. 275: 1-21, 2008.
[Journal]
64)  Pletneva NV, Pletnev SV, Chudakov DM, Tikhonova TV, Popov VO, Martynov VI, Wlodawer A, Dauter Z, Pletnev VZ.
[Three-dimensional structure of yellow fluorescent protein zYFP538 from Zoanthus sp. at the resolution 1.8 angstrom].
Bioorg. Khim. 33: 421-30, 2007.
[Journal]
65)  Chruszcz M, Kong Y, Dauter Z, Brown M, Minor W.
2-amino-4-(4-chloro-3-methylphenyl)-proplyl-1,3-thiazolium iodide.
Acta Crystallogr E Struct Rep Online. E63: o1598-o1600, 2007.
[Journal]
66)  Cymborowski M, Chruszcz M, Dauter Z, Minor W.
3-Iodo-L-tryosine monohydrate.
Acta Crystallogr D Biol Crystallogr. D63: o1557-o1559, 2007.
[Journal]
67)  Moulaei T, Botos I, Ziolkowska NE, Bokesch HR, Krumpe LR, McKee TC, O'Keefe BR, Dauter Z, Wlodawer A.
Atomic-resolution crystal structure of the antiviral lectin scytovirin.
Protein Sci. 16: 2756-60, 2007.
[Journal]
68)  Dauter Z, Baker T.
Numerology.
Acta Crystallogr. D Biol. Crystallogr. 63: 275, 2007.
[Journal]
69)  Jaskolski M, Gilski M, Dauter Z, Wlodawer A.
Numerology versus reality: a voice in a recent dispute.
Acta Crystallogr. D Biol. Crystallogr. 63: 1282-3, 2007.
[Journal]
70)  Pletneva N, Pletnev V, Tikhonova T, Pakhomov AA, Popov V, Martynov VI, Wlodawer A, Dauter Z, Pletnev S.
Refined crystal structures of red and green fluorescent proteins from the button polyp Zoanthus.
Acta Crystallogr. D Biol. Crystallogr. 63: 1082-93, 2007.
[Journal]
71)  Jaskolski M, Gilski M, Dauter Z, Wlodawer A.
Stereochemical restraints revisited: how accurate are refinement targets and how much should protein structures be allowed to deviate from them?.
Acta Crystallogr. D Biol. Crystallogr. 63: 611-20, 2007.
[Journal]
72)  Meijers R, Adolph HW, Dauter Z, Wilson KS, Lamzin VS, Cedergren-Zeppezauer ES.
Structural evidence for a ligand coordination switch in liver alcohol dehydrogenase.
Biochemistry. 46: 5446-54, 2007.
[Journal]
73)  Pletneva N, Pletnev S, Chudakov D, Tikhonov T, Popov V, Martynov V, Wlodawer A, Dauter Z, Pletnev V.
Three-dimensional structure of yellow fluorescent protein zYFP538 from Zoanthus sp. at the resolution 1.8 angstrom.
Russ. J. Bioorg. Chem. 33: 390-398, 2007.
[Journal]
74)  Wang J, Wlodawer A, Dauter Z.
What happens when the signs of anomalous differences or the handedness of substructure are inverted?.
Acta Crystallogr. D Biol. Crystallogr. 63: 751-8, 2007.
[Journal]
75)  Velmurugan D, Rajakannan V, Gayathri D, Banumathi B, Yamane T, Dauter Z, Dauter M, Sekar K.
Ab initio structure determination of the triple mutant (k53,56,121M) of bovine pancreatic phospholipase A2 at atomic and high resolution using ACORN.
Current Science. 90: 1091-1099, 2006.
[Journal]
76)  Sekar K, Yogavel M, Gayathri D, Velmurugan D, Krishna R, Poi MJ, Dauter Z, Dauter M, Tsai MD.
Atomic resolution structure of the double mutant (K53,56M) of bovine pancreatic phospholipase A2.
Acta Crystallograph. Sect. F Struct. Biol. Cryst. Commun. 62: 1-5, 2006.
[Journal]
77)  Bielnicki J, Devedjiev Y, Derewenda U, Dauter Z, Joachimiak A, Derewenda ZS.
B. subtilis ykuD protein at 2.0 A resolution: insights into the structure and function of a novel, ubiquitous family of bacterial enzymes.
Proteins. 62: 144-51, 2006.
[Journal]
78)  Dauter Z.
Current state and prospects of macromolecular crystallography.
Acta Crystallogr. D Biol. Crystallogr. 62: 1-11, 2006.
[Journal]
79)  Dauter Z.
Estimation of anomalous signal in diffraction data.
Acta Crystallogr. D Biol. Crystallogr. 62: 867-76, 2006.
[Journal]
80)  Dauter M, Dauter Z.
Phase determination using halide ions.
Methods Mol. Biol. 364: 149-58, 2006.
[Journal]
81)  Jedrzejczak R, Dauter Z, Dauter M, Piatek R, Zalewska B, Mroz M, Bury K, Nowicki B, Kur J.
Structure of DraD invasin from uropathogenic Escherichia coli: a dimer with swapped beta-tails.
Acta Crystallogr. D Biol. Crystallogr. 62: 157-64, 2006.
[Journal]
82)  Sevcik J, Hostinova E, Solovicova A, Gasperik J, Dauter Z, Wilson KS.
Structure of the complex of a yeast glucoamylase with acarbose reveals the presence of a raw starch binding site on the catalytic domain.
FEBS J. 273: 2161-71, 2006.
[Journal]
83)  Jedrzejczak R, Dauter M, Dauter Z, Olszewski M, Dlugolecka A, Kur J.
Structure of the single-stranded DNA-binding protein SSB from Thermus aquaticus.
Acta Crystallogr. D Biol. Crystallogr. 62: 1407-12, 2006.
[Journal]
84)  Sekar K, Yogavel M, Kanaujia SP, Sharma A, Velmurugan D, Poi MJ, Dauter Z, Tsai MD.
Suggestive evidence for the involvement of the second calcium and surface loop in interfacial binding: monoclinic and trigonal crystal structures of a quadruple mutant of phospholipase A(2).
Acta Crystallogr. D Biol. Crystallogr. 62: 717-24, 2006.
[Journal]
85)  Liu Y, Cheney MD, Gaudet JJ, Chruszcz M, Lukasik SM, Sugiyama D, Lary J, Cole J, Dauter Z, Minor W, Speck NA, Bushweller JH.
The tetramer structure of the Nervy homology two domain, NHR2, is critical for AML1/ETO's activity.
Cancer Cell. 9: 249-60, 2006.
[Journal]
86)  Wang J, Dauter M, Dauter Z.
What can be done with a good crystal and an accurate beamline?.
Acta Crystallogr. D Biol. Crystallogr. 62: 1475-83, 2006.
[Journal]
87)  Sekar K, Rajakannan V, Gayathri D, Velmurugan D, Poi MJ, Dauter M, Dauter Z, Tsai MD.
Atomic resolution (0.97 A) structure of the triple mutant (K53,56,121M) of bovine pancreatic phospholipase A2.
Acta Crystallograph. Sect. F Struct. Biol. Cryst. Commun. 61: 3-7, 2005.
[Journal]
88)  Yuan YR, Pei Y, Ma JB, Kuryavyi V, Zhadina M, Meister G, Chen HY, Dauter Z, Tuschl T, Patel DJ.
Crystal Structure of A. aeolicus Argonaute, a Site-Specific DNA-Guided Endoribonuclease, Provides Insights into RISC-Mediated mRNA Cleavage.
Mol Cell. 19: 405-19, 2005.
[Journal]
89)  Dauter Z.
Efficient use of synchrotron radiation for macromolecular diffraction data collection.
Prog Biophys Mol Biol. 89: 153-72, 2005.
[Journal]
90)  Dauter Z, Botos I, LaRonde-LeBlanc N, Wlodawer A.
Pathological crystallography: case studies of several unusual macromolecular crystals.
Acta Crystallogr D Biol Crystallogr. 61: 967-75, 2005.
[Journal]
91)  Ramagopal UA, Dauter Z, Thirumuruhan R, Fedorov E, Almo SC.
Radiation-induced site-specific damage of mercury derivatives: phasing and implications.
Acta Crystallogr. D Biol. Crystallogr. 61: 1289-98, 2005.
[Journal]
92)  Serganov A, Keiper S, Malinina L, Tereshko V, Skripkin E, Hobartner C, Polonskaia A, Phan AT, Wombacher R, Micura R, Dauter Z, Jäschke A, Patel DJ.
Structural basis for Diels-Alder ribozyme-catalyzed carbon-carbon bond formation.
Nat Struct Mol Biol. 12: 218-24, 2005.
[Journal]
93)  Davies GJ, Brzozowski AM, Dauter Z, Rasmussen MD, Borchert TV, Wilson KS.
Structure of a Bacillus halmapalus family 13 alpha-amylase, BHA, in complex with an acarbose-derived nonasaccharide at 2.1 A resolution.
Acta Crystallogr D Biol Crystallogr. 61: 190-3, 2005.
[Journal]
94)  Saikrishnan K, Manjunath GP, Singh P, Jeyakanthan J, Dauter Z, Sekar K, Muniyappa K, Vijayan M.
Structure of Mycobacterium smegmatissingle-stranded DNA-binding protein and a comparative study involving homologus SSBs: biological implications of structural plasticity and variability in quaternary association.
Acta Crystallogr D Biol Crystallogr. 61: 1140-8, 2005.
[Journal]
95)  Sekar K, Rajakannan V, Velmurugan D, Yamane T, Thirumurugan R, Dauter M, Dauter Z.
A redetermination of the structure of the triple mutant (K53,56,120M) of phospholipase A2 at 1.6 A resolution using sulfur-SAS at 1.54 A wavelength.
Acta Crystallogr D Biol Crystallogr. 60: 1586-90, 2004.
[Journal]
96)  Teplyakov A, Pullalarevu S, Obmolova G, Doseeva V, Galkin A, Herzberg O, Dauter M, Dauter Z, Gilliland GL.
Crystal structure of the YffB protein from Pseudomonas aeruginosa suggests a glutathione-dependent thiol reductase function.
BMC Struct Biol. 4: 5, 2004.
[Journal]
97)  Sevcik J, Dauter Z, Wilson KS.
Crystal structure reveals two alternative conformations in the active site of ribonuclease Sa2.
Acta Crystallogr D Biol Crystallogr. 60: 1198-204, 2004.
[Journal]
98)  Dauter Z.
Phasing in iodine for structure determination.
Nat Biotechnol. 22: 1239-40, 2004.
[Journal]
99)  Singh DD, Saikrishnan K, Kumar P, Dauter Z, Sekar K, Surolia A, Vijayan M.
Purification, crystallization and preliminary X-ray structure analysis of the banana lectin from Musa paradisiaca.
Acta Crystallogr D Biol Crystallogr. 60: 2104-6, 2004.
[Journal]
100)  Zwart PH, Banumathi S, Dauter M, Dauter Z.
Radiation-damage-induced phasing with anomalous scattering: substructure solution and phasing.
Acta Crystallogr D Biol Crystallogr. 60: 1958-63, 2004.
[Journal]
101)  Banumathi S, Zwart PH, Ramagopal UA, Dauter M, Dauter Z.
Structural effects of radiation damage and its potential for phasing.
Acta Crystallogr D Biol Crystallogr. 60: 1085-93, 2004.
[Journal]
102)  Botos I, Melnikov EE, Cherry S, Tropea JE, Khalatova AG, Rasulova F, Dauter Z, Maurizi MR, Rotanova TV, Wlodawer A, Gustchina A.
The catalytic domain of Escherichia coli Lon protease has a unique fold and a Ser-Lys dyad in the active site.
J Biol Chem. 279: 8140-8, 2004.
[Journal]
103)  Derewenda U, Oleksy A, Stevenson AS, Korczynska J, Dauter Z, Somlyo AP, Otlewski J, Somlyo AV, Derewenda ZS.
The crystal structure of RhoA in complex with the DH/PH fragment of PDZRhoGEF, an activator of the Ca(2+) sensitization pathway in smooth muscle.
Structure (Camb). 12: 1955-65, 2004.
[Journal]
104)  Janda I, Devedjiev Y, Derewenda U, Dauter Z, Bielnicki J, Cooper DR, Graf PC, Joachimiak A, Jakob U, Derewenda ZS.
The crystal structure of the reduced, Zn2+-bound form of the B. subtilis Hsp33 chaperone and its implications for the activation mechanism.
Structure (Camb). 12: 1901-7, 2004.
[Journal]
105)  Lubkowski J, Dauter M, Aghaiypour K, Wlodawer A, Dauter Z.
Atomic resolution structure of Erwinia chrysanthemi L-asparaginase.
Acta Crystallogr D Biol Crystallogr. 59: 84-92, 2003.
[Journal]
106)  Kim JK, Yang IS, Rhee S, Dauter Z, Lee YS, Park SS, Kim KH.
Crystal structures of glutaryl 7-aminocephalosporanic acid acylase: insight into autoproteolytic activation.
Biochemistry. 42: 4084-93, 2003.
[Journal]
107)  Kim JK, Yang IS, Rhee S, Dauter Z, Lee YS, Park SS, Kim KH.
Crystal structures of glutaryl 7-aminocephalosporanic acid acylase: insight into autoproteolytic activation.
Biochemistry. 42: 4084-93, 2003.
[Journal]
108)  Us0n I, Schmidt B, von Bulow R, Grimme S, von Figura K, Dauter M, Rajashankar KR, Dauter Z, Sheldrick GM.
Locating the anomalous scatterer substructures in halide and sulfur phasing.
Acta Crystallogr D Biol Crystallogr. 59: 57-66, 2003.
[Journal]
109)  Kang BS, Cooper DR, Jelen F, Devedjiev Y, Derewenda U, Dauter Z, Otlewski J, Derewenda ZS.
PDZ tandem of human syntenin. Crystal structure and functional properties.
Structure (Camb). 11: 459-68, 2003.
[Journal]
110)  Banumathi S, Dauter M, Dauter Z.
Phasing at high resolution using Ta6Br12 cluster.
Acta Crystallogr D Biol Crystallogr. 59: 492-8, 2003.
[Journal]
111)  Ramagopal UA, Dauter M, Dauter Z.
Phasing on anomalous signal of sulfurs: what is the limit?.
Acta Crystallogr D Biol Crystallogr. 59: 1020-7, 2003.
[Journal]
112)  Nagem RA, Polikarpov I, Dauter Z.
Phasing on rapidly soaked ions.
Methods Enzymol. 374: 120-37, 2003.
[Journal]
113)  Dauter Z.
Protein structures at atomic resolution.
Methods Enzymol. 368: 288-337, 2003.
[Journal]
114)  Kim MH, Derewenda U, Devedjiev Y, Dauter Z, Derewenda ZS.
Purification and crystallization of the N-terminal domain from the human doublecortin-like kinase.
Acta Crystallogr D Biol Crystallogr. 59: 502-5, 2003.
[Journal]
115)  Ramagopal UA, Dauter M, Dauter Z.
SAD manganese in two crystal forms of glucose isomerase.
Acta Crystallogr D Biol Crystallogr. 59: 868-75, 2003.
[Journal]
116)  Miller M, Shuman JD, Sebastian T, Dauter Z, Johnson PF.
Structural basis for DNA recognition by the basic region leucine zipper transcription factor CCAAT/enhancer-binding protein alpha.
J Biol Chem. 278: 15178-84, 2003.
[Journal]
117)  Kim MH, Cierpicki T, Derewenda U, Krowarsch D, Feng Y, Devedjiev Y, Dauter Z, Walsh CA, Otlewski J, Bushweller JH, Derewenda ZS.
The DCX-domain tandems of doublecortin and doublecortin-like kinase.
Nat Struct Biol. 10: 324-33, 2003.
[Journal]
118)  Kim MH, Cierpicki T, Derewenda U, Krowarsch D, Feng Y, Devedjiev Y, Dauter Z, Walsh CA, Otlewski J, Bushweller JH, Derewenda ZS.
The DCX-domain tandems of doublecortin and doublecortin-like kinase.
Nat Struct Biol. 10: 324-33, 2003.
[Journal]
119)  Dauter Z.
Twinned crystals and anomalous phasing.
Acta Crystallogr D Biol Crystallogr. 59: 2004-16, 2003.
[Journal]
120)  Baniecki ML, McGrath WJ, Dauter Z, Mangel WF.
Adenovirus proteinase: crystallization and preliminary X-ray diffraction studies to atomic resolution.
Acta Crystallogr D Biol Crystallogr. 58: 1462-4, 2002.
[Journal]
121)  Sevcik J, Lamzin VS, Dauter Z, Wilson KS.
Atomic resolution data reveal flexibility in the structure of RNase Sa.
Acta Crystallogr D Biol Crystallogr. 58: 1307-13, 2002.
[Journal]
122)  Dauter Z, Nagem RAP.
Direct way to anomalous scatterers.
Z. Kristallogr. 217: 694-702, 2002.
[Journal]
123)  Dauter Z, Dauter M, Dodson E.
Jolly SAD.
Acta Crystallogr D Biol Crystallogr. 58: 494-506, 2002.
[Journal]
124)  Martin TW, Dauter Z, Devedjiev Y, Sheffield P, Jelen F, He M, Sherman DH, Otlewski J, Derewenda ZS, Derewenda U.
Molecular basis of mitomycin C resistance in streptomyces: structure and function of the MRD protein.
Structure (Camb). 10: 933-42, 2002.
[Journal]
125)  Dauter Z.
New approaches to high-throughput phasing.
Curr Opin Struct Biol. 12: 674-8, 2002.
[Journal]
126)  Dauter Z.
One-and-a-half wavelength approach.
Acta Crystallogr D Biol Crystallogr. 58: 1958-67, 2002.
[Journal]
127)  Brzozowski AM, Dodson EJ, Dodson GG, Murshudov GN, Verma C, Turkenburg JP, de Bree FM, Dauter Z.
Structural origins of the functional divergence of human insulin-like growth factor-I and insulin.
Biochemistry. 41: 9389-97, 2002.
[Journal]
128)  Derewenda U, Li J, Derewenda Z, Dauter Z, Mueller GA, Rule GS, Benjamin DC.
The crystal structure of a major dust mite allergen Der p 2, and its biological implications.
J Mol Biol. 318: 189-97, 2002.
[Journal]
129)  Oganesyan V, Oganesyan N, Terzyan S, Qu D, Dauter Z, Esmon NL, Esmon CT.
The crystal structure of the endothelial protein C receptor and a bound phospholipid.
J Biol Chem. 277: 24851-4, 2002.
[Journal]
130)  Mateja A, Devedjiev Y, Krowarsch D, Longenecker K, Dauter Z, Otlewski J, Derewenda ZS.
The impact of Glu-->Ala and Glu-->Asp mutations on the crystallization properties of RhoGDI: the structure of RhoGDI at 1.3 A resolution.
Acta Crystallogr. D Biol. Crystallogr. 58: 1983-91, 2002.
[Journal]
131)  Murshudov GN, Grebenko AI, Brannigan JA, Antson AA, Barynin VV, Dodson GG, Dauter Z, Wilson KS, Melik-Adamyan WR.
The structures of Micrococcus lysodeikticus catalase, its ferryl intermediate (compound II) and NADPH complex.
Acta Crystallogr. D Biol. Crystallogr. 58: 1972-82, 2002.
[Journal]
132)  Dauter Z, Adamiak DA.
Anomalous signal of phosphorus used for phasing DNA oligomer: importance of data redundancy.
Acta Crystallogr D Biol Crystallogr. 57: 990-5, 2001.
[Journal]
133)  Wlodawer A, Li M, Dauter Z, Gustchina A, Uchida K, Oyama H, Dunn BM, Oda K.
Carboxyl proteinase from Pseudomonas defines a novel family of subtilisin-like enzymes.
Nat Struct Biol. 8: 442-6, 2001.
[Journal]
134)  Dauter Z, Dauter M.
Entering a new phase: using solvent halide ions in protein structure determination.
Structure (Camb). 9: R21-6, 2001.
[Journal]
135)  Wlodawer A, Li M, Gustchina A, Dauter Z, Uchida K, Oyama H, Goldfarb NE, Dunn BM, Oda K.
Inhibitor complexes of the Pseudomonas serine-carboxyl proteinase.
Biochemistry. 40: 15602-11, 2001.
[Journal]
136)  Dauter Z, Li M, Wlodawer A.
Practical experience with the use of halides for phasing macromolecular structures: a powerful tool for structural genomics.
Acta Crystallogr D Biol Crystallogr. 57: 239-49, 2001.
[Journal]
137)  Dauter Z, Wilson KS.
Principles of monochromatic data collection.
International Tables for Crystallography, (M.G. Rossmann & E. Arnold, editors), Kluwer, The Netherlands. Volume F: Chapter 18.4, pp. 393 - 402, 2001.
[Journal]
138)  Nagem RA, Dauter Z, Polikarpov I.
Protein crystal structure solution by fast incorporation of negatively and positively charged anomalous scatterers.
Acta Crystallogr D Biol Crystallogr. 57: 996-1002, 2001.
[Journal]
139)  Dauter Z, Murshudov GN, Wilson KS.
Refinement at atomic resolution.
International Tables for Crystallography, (M.G. Rossmann & E. Arnold, editors), Kluwer, The Netherlands. Volume F: Chapter 18.4, pp. 393 - 402, 2001.
[Journal]
140)  Lehmann C, Debreczeni JE, Bunkoczi G, Dauter M, Dauter Z.
Structures of four crystal forms of decaplanin.
Helv. Chim. Acta. 86: 1478-1487, 20003.
[Journal]
141)  Li J, Derewenda U, Dauter Z, Smith S, Derewenda ZS.
Crystal structure of the Escherichia coli thioesterase II, a homolog of the human Nef binding enzyme.
Nat Struct Biol. 7: 555-9, 2000.
[Journal]
142)  Devedjiev Y, Dauter Z, Kuznetsov SR, Jones TL, Derewenda ZS.
Crystal structure of the human acyl protein thioesterase I from a single X-ray data set to 1.5 A.
Structure Fold Des. 8: 1137-46, 2000.
[Journal]
143)  Yang F, Dauter Z, Wlodawer A.
Effects of crystal twinning on the ability to solve a macromolecular structure using multiwavelength anomalous diffraction.
Acta Crystallogr D Biol Crystallogr. 56 ( Pt 8): 959-64, 2000.
[Journal]
144)  Dauter Z, Dauter M, Rajashankar KR.
Novel approach to phasing proteins: derivatization by short cryo-soaking with halides.
Acta Crystallogr D Biol Crystallogr. 56 ( Pt 2): 232-7, 2000.
[Journal]
145)  Yang F, Forrer P, Dauter Z, Conway JF, Cheng N, Cerritelli ME, Steven AC, Pluckthun A, Wlodawer A.
Novel fold and capsid-binding properties of the lambda-phage display platform protein gpD.
Nat Struct Biol. 7: 230-7, 2000.
[Journal]
146)  Brzozowski AM, Lawson DM, Turkenburg JP, Bisgaard-Frantzen H, Svendsen A, Borchert TV, Dauter Z, Wilson KS, Davies GJ.
Structural analysis of a chimeric bacterial alpha-amylase. High-resolution analysis of native and ligand complexes.
Biochemistry. 39: 9099-107, 2000.
[Journal]
147)  Longenecker KL, Zhang B, Derewenda U, Sheffield PJ, Dauter Z, Parsons JT, Zheng Y, Derewenda ZS.
Structure of the BH domain from graf and its implications for Rho GTPase recognition.
J Biol Chem. 275: 38605-10, 2000.
[Journal]
148)  Ducros V, Charnock SJ, Derewenda U, Derewenda ZS, Dauter Z, Dupont C, Shareck F, Morosoli R, Kluepfel D, Davies GJ.
Substrate specificity in glycoside hydrolase family 10. Structural and kinetic analysis of the Streptomyces lividans xylanase 10A.
J Biol Chem. 275: 23020-6, 2000.
[Journal]
149)  Hempel A, Camerman N, Dauter Z, Mastropaolo D, Camerman A.
The antiestrogen [2-(4-benzylphenoxy)ethyl]diethylammonium chloride.
Acta Crystallogr C. 56 ( Pt 4): 455-6, 2000.
[Journal]
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