Our Science – Shapiro Website
Bruce A. Shapiro, Ph.D.
Selected Publications |
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| 1)
Afonin KA, Viard M, Martins AN, Lockett SJ, Maciag AE, Freed EO, Heldman E, Jaeger L, Blumenthal R, Shapiro BA. Activation of different split functionalities on re-association of RNA-DNA hybrids. Nat Nanotechnol. 8: 296-304, 2013. [Journal] |
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| 2)
Kim T, Afonin KA, Viard M, Koyfman AY, Sparks S, Heldman E, Grinberg S, Linder C, Blumenthal RP, Shapiro BA. In Silico, In Vitro, and In Vivo Studies Indicate the Potential Use of Bolaamphiphiles for Therapeutic siRNAs Delivery. Mol Ther Nucleic Acids. 2: e80, 2013. [Journal] |
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| 3)
Sztuba-Solinska J, Teramoto T, Rausch JW, Shapiro BA, Padmanabhan R, Le Grice SF. Structural complexity of Dengue virus untranslated regions: cis-acting RNA motifs and pseudoknot interactions modulating functionality of the viral genome. Nucleic Acids Res. [Epub ahead of print], 2013. [Journal] |
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| 4)
Zhong L, Wang JT, Wen D, Shapiro BA. Pre-miRNA classification via combinatorial feature mining and boosting (2012 IEEE International Conference on Bioinformatics and Biomedicine). . In Press. [Meeting Proceeding] |
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| 5)
Grabow WW, Afonin KA, Zakrevsky P, Walker FM, Calkins ER, Geary C, Kasprzak W, Bindewald E, Shapiro BA, Jaeger L. Sebastian M, Ninan N, Haghi AK, eds. RNA Nanotechnology in Nanomedicine. In: Nanomedicine and Drug Delivery (Recent Advances in Nanoscience and Nanotechnology). Volume 1. New Jersey: Apple Academic Press; 2012. p. 208-220 [Book Chapter] |
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| 6)
Kasprzak WK, Shapiro BA. Leontis N, Westhof E, eds. Computational prediction and modeling aid in the discovery of a conformational switch controlling replication and translation in a plus-strand RNA virus. In: RNA 3D Structure Analysis and Prediction (Nucleic Acids and Molecular Biology). New York: Springer; 2012. p. 119-142 [Book Chapter] |
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| 7)
Hua L, Wang JT, Ji X, Malhotra A, Khaladkar M, Shapiro BA, Zhang K. A method for discovering common patterns from two RNA secondary structures and its application to structural repeat detection. J Bioinform Comput Biol. 10: 1250001, 2012. [Journal] |
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| 8)
Gao F, Kasprzak W, Stupina VA, Shapiro BA, Simon AE. A ribosome-binding, 3' translational enhancer has a T-shaped structure and engages in a long distance RNA:RNA interaction. J. Virol. 86: 9828-42, 2012. [Journal] |
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| 9)
Afonin KA, Kireeva M, Grabow WW, Kashlev M, Jaeger L, Shapiro BA. Co-transcriptional Assembly of Chemically Modified RNA Nanoparticles Functionalized with siRNAs. Nano Lett. 12: 5192-5195, 2012. [Journal] |
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| 10)
Wolfe KC, Hastings WA, Dutta S, Long A, Shapiro BA, Woolf TB, Guthold M, Chirikjian GS. Multiscale Modeling of Double-Helical DNA and RNA: A Unification through Lie Groups. J. Phys. Chem. B. 116: 8556-72, 2012. [Journal] |
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This page was last updated on 4/30/2013.
