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Our Science – Schneider Website

Thomas D. Schneider, Ph.D.

Selected Publications

1)  Jeong JH, Kim HJ, Kim KH, Shin M, Hong Y, Rhee JH, Schneider TD, Choy HE.
An unusual feature associated with LEE1 P1 promoters in enteropathogenic Escherichia coli (EPEC).
Mol. Microbiol. 83: 612-22, 2012.
2)  Lou H, Li H, Yeager M, Im K, Gold B, Schneider TD, Fraumeni JF, Chanock SJ, Anderson SK, Dean M.
Promoter variants in the MSMB gene associated with prostate cancer regulate MSMB/NCOA4 fusion transcripts.
Hum. Genet. 131: 1453-66, 2012.
3)  Schneider TD.
70% efficiency of bistate molecular machines explained by information theory, high dimensional geometry and evolutionary convergence.
Nucleic Acids Res. 38: 5995-6006, 2010.
4)  Schneider TD.
A brief review of molecular information theory.
Nano Commun Netw. 1: 173-180, 2010.
5)  Lyakhov IG, Krishnamachari A, Schneider TD.
Discovery of novel tumor suppressor p53 response elements using information theory.
Nucleic Acids Res. 36(11): 3828-33, 2008.
6)  Hemm MR, Paul BJ, Schneider TD, Storz G, Rudd KE.
Small membrane proteins found by comparative genomics and ribosome binding site models.
Mol. Microbiol. 70: 1487-501, 2008.
7)  Inui H, Oh K, Nadem C, Ueda T, Khan SG, Metin A, Gozukara E, Emmert S, Slor H, Busch DB, Baker CC, Digiovanna JJ, Tamura D, Seitz CS, Gratchev A, Wu WH, Chung KY, Chung HJ, Azizi E, Woodgate R, Schneider TD, Kraemer KH.
Xeroderma Pigmentosum-Variant Patients from America, Europe, and Asia.
J. Invest. Dermatol. 128(8): 2055-68, 2008.
8)  Shultzaberger RK, Chen Z, Lewis KA, Schneider TD.
Anatomy of Escherichia coli sigma70 promoters.
Nucleic Acids Res. 35: 771-88, 2007.
9)  Shultzaberger RK, Roberts LR, Lyakhov IG, Sidorov IA, Stephen AG, Fisher RJ, Schneider TD.
Correlation between binding rate constants and individual information of E. coli Fis binding sites.
Nucleic Acids Res. 35(16): 5275-83, 2007.
10)  Chen Z, Lewis KA, Shultzaberger RK, Lyakhov IG, Zheng M, Doan B, Storz G, Schneider TD.
Discovery of Fur binding site clusters in Escherichia coli by information theory models.
Nucleic Acids Res. 35: 6762-77, 2007.
Click Here to View Expanded Bibliography.

This page was last updated on 4/11/2014.