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Our Science – Subramaniam Website

Sriram Subramaniam, Ph.D.

Selected Publications
1)  Kuybeda O, Frank GA, Bartesaghi A, Borgnia M, Subramaniam S, Sapiro G.
A collaborative framework for 3D alignment and classification of heterogeneous subvolumes in cryo-electron tomography.
J. Struct. Biol. 181: 116-27, 2013. [Journal]
2)  Milne JL, Borgnia MJ, Bartesaghi A, Tran EE, Earl LA, Schauder DM, Lengyel J, Pierson J, Patwardhan A, Subramaniam S.
Cryo-electron microscopy--a primer for the non-microscopist.
FEBS J. 280: 28-45, 2013. [Journal]
3)  Schauder DM, Kuybeda O, Zhang J, Klymko K, Bartesaghi A, Borgnia MJ, Mayer ML, Subramaniam S.
Glutamate receptor desensitization is mediated by changes in quaternary structure of the ligand binding domain.
Proc. Natl. Acad. Sci. U.S.A. 110: 5921-6, 2013. [Journal]
4)  Merk A, Subramaniam S.
HIV-1 envelope glycoprotein structure.
Curr. Opin. Struct. Biol. [Epub ahead of print], 2013. [Journal]
5)  Harris AK, Bartesaghi A, Milne JL, Subramaniam S.
HIV-1 envelope glycoprotein trimers display open quaternary conformation when bound to the gp41 MPER-directed broadly neutralizing antibody Z13e1.
J. Virol. [Epub ahead of print], 2013. [Journal]
6)  Meyerson JR, Tran EE, Kuybeda O, Chen W, Dimitrov DS, Gorlani A, Verrips T, Lifson JD, Subramaniam S.
Molecular structures of trimeric HIV-1 Env in complex with small antibody derivatives.
Proc. Natl. Acad. Sci. U.S.A. 110: 513-8, 2013. [Journal]
7)  Harris AK, Meyerson JR, Matsuoka Y, Kuybeda O, Moran A, Bliss D, Das SR, Yewdell JW, Sapiro G, Subbarao K, Subramaniam S.
Structure and accessibility of HA trimers on intact 2009 H1N1 pandemic influenza virus to stem region-specific neutralizing antibodies.
Proc. Natl. Acad. Sci. U.S.A. 110: 4592-7, 2013. [Journal]
8)  Narayan K, Prosa TJ, Fu J, Kelly TF, Subramaniam S.
Chemical mapping of mammalian cells by atom probe tomography.
J. Struct. Biol. 178: 98-107, 2012. [Journal]
9)  Frank GA, Bartesaghi A, Kuybeda O, Borgnia MJ, White TA, Sapiro G, Subramaniam S.
Computational separation of conformational heterogeneity using cryo-electron tomography and 3D sub-volume averaging.
J. Struct. Biol. 178: 165-76, 2012. [Journal]
10)  Patwardhan A, Carazo JM, Carragher B, Henderson R, Heymann JB, Hill E, Jensen GJ, Lagerstedt I, Lawson CL, Ludtke SJ, Mastronarde D, Moore WJ, Roseman A, Rosenthal P, Sorzano CO, Sanz-García E, Scheres SH, Subramaniam S, Westbrook J, Winn M, Swedlow JR, Kleywegt GJ.
Data management challenges in three-dimensional EM.
Nat. Struct. Mol. Biol. 19: 1203-7, 2012. [Journal]
Click Here to View Expanded Bibliography.

This page was last updated on 4/25/2013.